Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 CLK3P2-201ENST00000427566 1453 ntBASIC13.23□□□□□ -0.29
GCM1Q9NP62 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 RN7SL399P-201ENST00000471648 279 ntBASIC13.22□□□□□ -0.29
GCM1Q9NP62 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 AC140912.1-201ENST00000577171 1054 ntBASIC13.22□□□□□ -0.29
GCM1Q9NP62 AC015910.1-201ENST00000579400 975 ntBASIC13.22□□□□□ -0.29
GCM1Q9NP62 SPDYE22P-201ENST00000582158 798 ntBASIC13.22□□□□□ -0.29
GCM1Q9NP62 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.22□□□□□ -0.29
GCM1Q9NP62 AL662799.1-202ENST00000614205 422 ntBASIC13.22□□□□□ -0.29
GCM1Q9NP62 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.22□□□□□ -0.29
GCM1Q9NP62 AC105250.1-201ENST00000509378 2057 ntBASIC13.22□□□□□ -0.29
GCM1Q9NP62 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCM1Q9NP62 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GCM1Q9NP62 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GCM1Q9NP62 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
GCM1Q9NP62 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GCM1Q9NP62 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GCM1Q9NP62 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GCM1Q9NP62 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GCM1Q9NP62 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GCM1Q9NP62 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GCM1Q9NP62 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.21□□□□□ -0.29
GCM1Q9NP62 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms