Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ARID3AQ99856 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARID3AQ99856 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
ARID3AQ99856 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ARID3AQ99856 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.71■□□□□ 0.43
ARID3AQ99856 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARID3AQ99856 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARID3AQ99856 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARID3AQ99856 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARID3AQ99856 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARID3AQ99856 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.71■□□□□ 0.43
ARID3AQ99856 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.71■□□□□ 0.42
ARID3AQ99856 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ARID3AQ99856 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.7■□□□□ 0.42
ARID3AQ99856 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 AL355306.1-201ENST00000415580 579 ntBASIC17.7■□□□□ 0.42
ARID3AQ99856 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.7■□□□□ 0.42
ARID3AQ99856 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.7■□□□□ 0.42
ARID3AQ99856 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 AC020765.3-201ENST00000613051 740 ntBASIC17.7■□□□□ 0.42
ARID3AQ99856 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ARID3AQ99856 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARID3AQ99856 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ARID3AQ99856 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.69■□□□□ 0.42
ARID3AQ99856 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 AL359183.1-201ENST00000623796 2132 ntBASIC17.69■□□□□ 0.42
ARID3AQ99856 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC17.69■□□□□ 0.42
ARID3AQ99856 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.69■□□□□ 0.42
ARID3AQ99856 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.69■□□□□ 0.42
ARID3AQ99856 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.69■□□□□ 0.42
ARID3AQ99856 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.69■□□□□ 0.42
ARID3AQ99856 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.69■□□□□ 0.42
ARID3AQ99856 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.69■□□□□ 0.42
ARID3AQ99856 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.69■□□□□ 0.42
ARID3AQ99856 AC010327.4-202ENST00000591484 748 ntBASIC17.69■□□□□ 0.42
ARID3AQ99856 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.69■□□□□ 0.42
ARID3AQ99856 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ARID3AQ99856 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
ARID3AQ99856 C20orf181-201ENST00000623918 480 ntBASIC17.69■□□□□ 0.42
ARID3AQ99856 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.69■□□□□ 0.42
ARID3AQ99856 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 WASH6P-202ENST00000359512 1437 ntBASIC17.69■□□□□ 0.42
ARID3AQ99856 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.69■□□□□ 0.42
ARID3AQ99856 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.69■□□□□ 0.42
ARID3AQ99856 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ARID3AQ99856 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ARID3AQ99856 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 LINC01144-201ENST00000626198 1710 ntBASIC17.69■□□□□ 0.42
ARID3AQ99856 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.69■□□□□ 0.42
ARID3AQ99856 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ARID3AQ99856 REXO1L8P-201ENST00000604378 1897 ntBASIC17.69■□□□□ 0.42
ARID3AQ99856 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
ARID3AQ99856 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ARID3AQ99856 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.69■□□□□ 0.42
ARID3AQ99856 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARID3AQ99856 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
ARID3AQ99856 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.68■□□□□ 0.42
ARID3AQ99856 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms