Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL13Q99616 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 RPL13AP25-201ENST00000484130 612 ntBASIC12.93□□□□□ -0.34
CCL13Q99616 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL13Q99616 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL13Q99616 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL13Q99616 CTBP2P3-201ENST00000585629 1255 ntBASIC12.93□□□□□ -0.34
CCL13Q99616 BRI3BPP1-201ENST00000594224 787 ntBASIC12.93□□□□□ -0.34
CCL13Q99616 AC027307.3-201ENST00000594262 1100 ntBASIC12.93□□□□□ -0.34
CCL13Q99616 TMEM261P1-201ENST00000604899 340 ntBASIC12.93□□□□□ -0.34
CCL13Q99616 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL13Q99616 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CCL13Q99616 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL13Q99616 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL13Q99616 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL13Q99616 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL13Q99616 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL13Q99616 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL13Q99616 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.92□□□□□ -0.34
CCL13Q99616 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 DRD5P1-201ENST00000456605 1438 ntBASIC12.92□□□□□ -0.34
CCL13Q99616 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL13Q99616 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL13Q99616 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCL13Q99616 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCL13Q99616 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL13Q99616 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL13Q99616 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 AC097376.2-205ENST00000610159 5334 ntBASIC12.92□□□□□ -0.34
CCL13Q99616 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCL13Q99616 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.92□□□□□ -0.34
CCL13Q99616 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCL13Q99616 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCL13Q99616 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL13Q99616 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCL13Q99616 INTS4P2-202ENST00000614726 2019 ntBASIC12.91□□□□□ -0.34
CCL13Q99616 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL13Q99616 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL13Q99616 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.91□□□□□ -0.34
CCL13Q99616 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL13Q99616 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL13Q99616 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CCL13Q99616 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 AC023024.2-201ENST00000623561 1993 ntBASIC12.91□□□□□ -0.34
CCL13Q99616 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCL13Q99616 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms