Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 PDIA3P1-201ENST00000471856 1510 ntBASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 MIR658-201ENST00000385210 100 ntBASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 RPL7P3-201ENST00000441388 714 ntBASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 CROCCP4-201ENST00000457096 498 ntBASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 FTH1P14-201ENST00000482930 551 ntBASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 AC025279.2-201ENST00000569730 653 ntBASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.96■□□□□ 0.14
CDK5RAP1Q96SZ6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDK5RAP1Q96SZ6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CDK5RAP1Q96SZ6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDK5RAP1Q96SZ6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.96■□□□□ 0.14
CDK5RAP1Q96SZ6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDK5RAP1Q96SZ6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.96■□□□□ 0.14
CDK5RAP1Q96SZ6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDK5RAP1Q96SZ6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDK5RAP1Q96SZ6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 KRT223P-202ENST00000449164 1292 ntBASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 AC022616.1-201ENST00000518688 554 ntBASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 RN7SL48P-201ENST00000579283 293 ntBASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 AC145423.3-201ENST00000615987 467 ntBASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 COX11-210ENST00000639671 696 ntBASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 AC012508.2-201ENST00000567613 1472 ntBASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDK5RAP1Q96SZ6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms