Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 MRPS18AP1-201ENST00000414458 589 ntBASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 DOC2GP-202ENST00000514950 1163 ntBASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 LINC01101-201ENST00000622953 1884 ntBASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.4□□□□□ -0.1
MS4A4EQ96PG1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 CLK3P2-201ENST00000427566 1453 ntBASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 LINC00528-201ENST00000600723 2160 ntBASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 RNA5SP421-201ENST00000516864 134 ntBASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 TPRX2P-201ENST00000535362 881 ntBASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 RARRES2P5-201ENST00000564013 466 ntBASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 AP000845.1-201ENST00000581677 2131 ntBASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MS4A4EQ96PG1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms