Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 Z97205.2-201ENST00000564697 1639 ntBASIC14.01□□□□□ -0.17
LRRC46Q96FV0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 KRT8P37-201ENST00000451609 1420 ntBASIC14.01□□□□□ -0.17
LRRC46Q96FV0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 MIR1909-201ENST00000411312 80 ntBASIC14.01□□□□□ -0.17
LRRC46Q96FV0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.01□□□□□ -0.17
LRRC46Q96FV0 AC112492.5-201ENST00000421897 457 ntBASIC14.01□□□□□ -0.17
LRRC46Q96FV0 AL442647.2-201ENST00000429864 857 ntBASIC14.01□□□□□ -0.17
LRRC46Q96FV0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 CTBP2P3-201ENST00000585629 1255 ntBASIC14.01□□□□□ -0.17
LRRC46Q96FV0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 AC139749.1-202ENST00000617529 3139 ntBASIC14.01□□□□□ -0.17
LRRC46Q96FV0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC46Q96FV0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14□□□□□ -0.17
LRRC46Q96FV0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14□□□□□ -0.17
LRRC46Q96FV0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14□□□□□ -0.17
LRRC46Q96FV0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14□□□□□ -0.17
LRRC46Q96FV0 AL691432.1-201ENST00000596308 1422 ntBASIC14□□□□□ -0.17
LRRC46Q96FV0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14□□□□□ -0.17
LRRC46Q96FV0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LRRC46Q96FV0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14□□□□□ -0.17
LRRC46Q96FV0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14□□□□□ -0.17
LRRC46Q96FV0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LRRC46Q96FV0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LRRC46Q96FV0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14□□□□□ -0.17
LRRC46Q96FV0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LRRC46Q96FV0 RN7SL399P-201ENST00000471648 279 ntBASIC14□□□□□ -0.17
LRRC46Q96FV0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14□□□□□ -0.17
LRRC46Q96FV0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14□□□□□ -0.17
LRRC46Q96FV0 AC092552.1-201ENST00000547243 906 ntBASIC14□□□□□ -0.17
LRRC46Q96FV0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRRC46Q96FV0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14□□□□□ -0.17
LRRC46Q96FV0 Six3os1_5.1-201ENST00000611000 271 ntBASIC14□□□□□ -0.17
LRRC46Q96FV0 WFDC1-204ENST00000613603 549 ntBASIC14□□□□□ -0.17
LRRC46Q96FV0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14□□□□□ -0.17
LRRC46Q96FV0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 AC013268.4-201ENST00000637413 2228 ntBASIC14□□□□□ -0.17
LRRC46Q96FV0 AL136982.4-201ENST00000437689 1740 ntBASIC14□□□□□ -0.17
LRRC46Q96FV0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14□□□□□ -0.17
LRRC46Q96FV0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14□□□□□ -0.17
LRRC46Q96FV0 AC023908.3-201ENST00000564211 3047 ntBASIC14□□□□□ -0.17
LRRC46Q96FV0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC46Q96FV0 HLA-DQB2-231ENST00000435145 2026 ntBASIC14□□□□□ -0.17
LRRC46Q96FV0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14□□□□□ -0.17
LRRC46Q96FV0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms