Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 AC087499.6-201ENST00000411576 835 ntBASIC16.43■□□□□ 0.22
LMO3Q8TAP4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.43■□□□□ 0.22
LMO3Q8TAP4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.43■□□□□ 0.22
LMO3Q8TAP4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 FAM45BP-202ENST00000592932 1624 ntBASIC16.43■□□□□ 0.22
LMO3Q8TAP4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.43■□□□□ 0.22
LMO3Q8TAP4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 PIN1P1-201ENST00000412108 996 ntBASIC16.42■□□□□ 0.22
LMO3Q8TAP4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 WASH4P-201ENST00000564273 1246 ntBASIC16.42■□□□□ 0.22
LMO3Q8TAP4 DUX4L47-201ENST00000566374 394 ntBASIC16.42■□□□□ 0.22
LMO3Q8TAP4 AC008494.3-201ENST00000606615 944 ntBASIC16.42■□□□□ 0.22
LMO3Q8TAP4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 BX539320.1-201ENST00000623759 877 ntBASIC16.42■□□□□ 0.22
LMO3Q8TAP4 AC005252.2-201ENST00000624630 1141 ntBASIC16.42■□□□□ 0.22
LMO3Q8TAP4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 AC023090.2-201ENST00000625182 2110 ntBASIC16.42■□□□□ 0.22
LMO3Q8TAP4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.42■□□□□ 0.22
LMO3Q8TAP4 AL513477.1-201ENST00000602865 2407 ntBASIC16.41■□□□□ 0.22
LMO3Q8TAP4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 AC232323.1-201ENST00000540724 2099 ntBASIC16.41■□□□□ 0.22
LMO3Q8TAP4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms