Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.97■□□□□ 0.15
PHTF2Q8N3S3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 AL133267.1-201ENST00000398220 340 ntBASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 RPL7P3-201ENST00000441388 714 ntBASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 GAPDHP40-201ENST00000505218 1006 ntBASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 AL583810.1-201ENST00000553344 1045 ntBASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.96■□□□□ 0.15
PHTF2Q8N3S3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.96■□□□□ 0.14
PHTF2Q8N3S3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.96■□□□□ 0.14
PHTF2Q8N3S3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.96■□□□□ 0.14
PHTF2Q8N3S3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PHTF2Q8N3S3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
PHTF2Q8N3S3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PHTF2Q8N3S3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.96■□□□□ 0.14
PHTF2Q8N3S3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 AC106760.1-201ENST00000508690 800 ntBASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 GNRHR2-203ENST00000581100 1187 ntBASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 AC107373.2-201ENST00000607735 490 ntBASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHTF2Q8N3S3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms