Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 GPR53P-205ENST00000457298 1084 ntBASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 AL359711.2-201ENST00000563105 872 ntBASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 AC120045.2-201ENST00000567334 178 ntBASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 AC000095.1-201ENST00000603208 874 ntBASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 OR2I1P-209ENST00000641730 5365 ntBASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 AC104640.1-201ENST00000562617 2109 ntBASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM48Q8IWZ4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM48Q8IWZ4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms