Protein–RNA interactions for Protein: Q7Z614

SNX20, Sorting nexin-20, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20Q7Z614 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.33■□□□□ 0.04
SNX20Q7Z614 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX20Q7Z614 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 AC091951.1-201ENST00000512854 2465 ntBASIC15.32■□□□□ 0.04
SNX20Q7Z614 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SNX20Q7Z614 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 AC120045.2-201ENST00000567334 178 ntBASIC15.31■□□□□ 0.04
SNX20Q7Z614 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 AC008494.3-201ENST00000606615 944 ntBASIC15.31■□□□□ 0.04
SNX20Q7Z614 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 AC012508.2-201ENST00000567613 1472 ntBASIC15.31■□□□□ 0.04
SNX20Q7Z614 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 AL138799.1-201ENST00000448213 1675 ntBASIC15.31■□□□□ 0.04
SNX20Q7Z614 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.31■□□□□ 0.04
SNX20Q7Z614 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX20Q7Z614 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.3■□□□□ 0.04
SNX20Q7Z614 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.3■□□□□ 0.04
SNX20Q7Z614 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SNX20Q7Z614 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.3■□□□□ 0.04
SNX20Q7Z614 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.3■□□□□ 0.04
SNX20Q7Z614 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNX20Q7Z614 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
SNX20Q7Z614 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
SNX20Q7Z614 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms