Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 AC005034.1-201ENST00000426657 489 ntBASIC14.25□□□□□ -0.13
ZNF550Q7Z398 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 TIMM17BP1-201ENST00000545713 516 ntBASIC14.25□□□□□ -0.13
ZNF550Q7Z398 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 AL645728.2-202ENST00000641679 227 ntBASIC14.25□□□□□ -0.13
ZNF550Q7Z398 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 TNRC18P2-201ENST00000417666 2714 ntBASIC14.25□□□□□ -0.13
ZNF550Q7Z398 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF550Q7Z398 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 GHSR-202ENST00000427970 912 ntBASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AC004233.3-201ENST00000607794 1269 ntBASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AC009118.2-201ENST00000613275 655 ntBASIC14.24□□□□□ -0.13
ZNF550Q7Z398 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.24□□□□□ -0.13
ZNF550Q7Z398 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AL035252.4-201ENST00000624174 288 ntBASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AC091951.1-201ENST00000512854 2465 ntBASIC14.24□□□□□ -0.13
ZNF550Q7Z398 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AP002414.2-201ENST00000591780 3365 ntBASIC14.24□□□□□ -0.13
ZNF550Q7Z398 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 AL121723.1-201ENST00000445194 1519 ntBASIC14.24□□□□□ -0.13
ZNF550Q7Z398 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF550Q7Z398 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZNF550Q7Z398 AC044860.1-202ENST00000559481 777 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms