Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 SRD5A3P1-201ENST00000603021 949 ntBASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 AL390754.1-201ENST00000619088 582 ntBASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 AC126755.1-201ENST00000525846 6405 ntBASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 AL121723.1-201ENST00000445194 1519 ntBASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 AC007292.2-201ENST00000593524 1812 ntBASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 CYMP-203ENST00000474680 1263 ntBASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NHLRC1Q6VVB1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NHLRC1Q6VVB1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.9□□□□□ -0.19
NHLRC1Q6VVB1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NHLRC1Q6VVB1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NHLRC1Q6VVB1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 AC104457.1-201ENST00000401024 814 ntBASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 FAM8A3P-201ENST00000427218 844 ntBASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 MEIS3P1-201ENST00000495167 958 ntBASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 IGHV3-42-201ENST00000520410 361 ntBASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NHLRC1Q6VVB1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms