Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AC023824.1-201ENST00000562945 2975 ntBASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 CTBP2P3-201ENST00000585629 1255 ntBASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 TMEM261P1-201ENST00000604899 340 ntBASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AJ011931.1-201ENST00000618749 2492 ntBASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 AL157414.3-201ENST00000624276 1954 ntBASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 AC140912.1-201ENST00000577171 1054 ntBASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN20Q4JDL3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 C1QBPP1-201ENST00000400117 770 ntBASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 AC093813.1-201ENST00000605066 256 ntBASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 CICP24-201ENST00000605464 2705 ntBASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms