Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.93□□□□□ -0.18
CDK5Q00535 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.93□□□□□ -0.18
CDK5Q00535 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDK5Q00535 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDK5Q00535 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDK5Q00535 AL035456.1-201ENST00000456064 1369 ntBASIC13.93□□□□□ -0.18
CDK5Q00535 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
CDK5Q00535 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
CDK5Q00535 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDK5Q00535 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDK5Q00535 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDK5Q00535 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDK5Q00535 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDK5Q00535 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDK5Q00535 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.93□□□□□ -0.18
CDK5Q00535 LINC01230-201ENST00000625222 3017 ntBASIC13.93□□□□□ -0.18
CDK5Q00535 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDK5Q00535 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.92□□□□□ -0.18
CDK5Q00535 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.92□□□□□ -0.18
CDK5Q00535 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.92□□□□□ -0.18
CDK5Q00535 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.92□□□□□ -0.18
CDK5Q00535 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.92□□□□□ -0.18
CDK5Q00535 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDK5Q00535 FAM58DP-201ENST00000428076 619 ntBASIC13.92□□□□□ -0.18
CDK5Q00535 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.92□□□□□ -0.18
CDK5Q00535 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.92□□□□□ -0.18
CDK5Q00535 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDK5Q00535 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 AC003101.2-201ENST00000612557 442 ntBASIC13.92□□□□□ -0.18
CDK5Q00535 AC105339.1-204ENST00000636249 355 ntBASIC13.92□□□□□ -0.18
CDK5Q00535 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CDK5Q00535 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.92□□□□□ -0.18
CDK5Q00535 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.92□□□□□ -0.18
CDK5Q00535 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDK5Q00535 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.92□□□□□ -0.18
CDK5Q00535 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDK5Q00535 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.92□□□□□ -0.18
CDK5Q00535 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.92□□□□□ -0.18
CDK5Q00535 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDK5Q00535 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.92□□□□□ -0.18
CDK5Q00535 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDK5Q00535 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CDK5Q00535 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.91□□□□□ -0.18
CDK5Q00535 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.91□□□□□ -0.18
CDK5Q00535 AL928921.2-201ENST00000641325 2442 ntBASIC13.91□□□□□ -0.18
CDK5Q00535 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.91□□□□□ -0.18
CDK5Q00535 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CDK5Q00535 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.91□□□□□ -0.18
CDK5Q00535 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CDK5Q00535 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CDK5Q00535 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 HTR5BP-201ENST00000430851 1154 ntBASIC13.91□□□□□ -0.18
CDK5Q00535 FDX1P1-201ENST00000449115 551 ntBASIC13.91□□□□□ -0.18
CDK5Q00535 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.91□□□□□ -0.18
CDK5Q00535 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CDK5Q00535 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.91□□□□□ -0.18
CDK5Q00535 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.91□□□□□ -0.18
CDK5Q00535 AC022145.2-201ENST00000598203 171 ntBASIC13.91□□□□□ -0.18
CDK5Q00535 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.91□□□□□ -0.18
CDK5Q00535 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.91□□□□□ -0.18
CDK5Q00535 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.91□□□□□ -0.18
CDK5Q00535 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CDK5Q00535 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms