Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RHBDL3P58872 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RHBDL3P58872 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.98■□□□□ 0.47
RHBDL3P58872 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RHBDL3P58872 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.98■□□□□ 0.47
RHBDL3P58872 NKAIN1P1-201ENST00000435754 582 ntBASIC17.98■□□□□ 0.47
RHBDL3P58872 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RHBDL3P58872 AC022748.3-201ENST00000621828 275 ntBASIC17.98■□□□□ 0.47
RHBDL3P58872 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.98■□□□□ 0.47
RHBDL3P58872 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.98■□□□□ 0.47
RHBDL3P58872 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.98■□□□□ 0.47
RHBDL3P58872 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RHBDL3P58872 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.98■□□□□ 0.47
RHBDL3P58872 AC011840.2-201ENST00000563063 1520 ntBASIC17.98■□□□□ 0.47
RHBDL3P58872 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.97■□□□□ 0.47
RHBDL3P58872 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.97■□□□□ 0.47
RHBDL3P58872 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.97■□□□□ 0.47
RHBDL3P58872 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RHBDL3P58872 AC020910.5-201ENST00000623668 1865 ntBASIC17.97■□□□□ 0.47
RHBDL3P58872 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.97■□□□□ 0.47
RHBDL3P58872 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RHBDL3P58872 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.97■□□□□ 0.47
RHBDL3P58872 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.97■□□□□ 0.47
RHBDL3P58872 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.97■□□□□ 0.47
RHBDL3P58872 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RHBDL3P58872 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RHBDL3P58872 AC044849.1-201ENST00000519737 1188 ntBASIC17.97■□□□□ 0.47
RHBDL3P58872 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.97■□□□□ 0.47
RHBDL3P58872 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RHBDL3P58872 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.97■□□□□ 0.47
RHBDL3P58872 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.97■□□□□ 0.47
RHBDL3P58872 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.97■□□□□ 0.47
RHBDL3P58872 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.97■□□□□ 0.47
RHBDL3P58872 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.97■□□□□ 0.47
RHBDL3P58872 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RHBDL3P58872 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.97■□□□□ 0.47
RHBDL3P58872 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.97■□□□□ 0.47
RHBDL3P58872 SSR4P1-203ENST00000599569 2260 ntBASIC17.97■□□□□ 0.47
RHBDL3P58872 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.97■□□□□ 0.47
RHBDL3P58872 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
RHBDL3P58872 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.97■□□□□ 0.47
RHBDL3P58872 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RHBDL3P58872 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RHBDL3P58872 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.96■□□□□ 0.47
RHBDL3P58872 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.96■□□□□ 0.47
RHBDL3P58872 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms