Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN8P56748 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CLDN8P56748 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN8P56748 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 AL161772.1-201ENST00000610494 4412 ntBASIC14.67□□□□□ -0.06
CLDN8P56748 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN8P56748 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CLDN8P56748 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN8P56748 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN8P56748 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.67□□□□□ -0.06
CLDN8P56748 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN8P56748 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN8P56748 AL109936.8-201ENST00000641772 604 ntBASIC14.67□□□□□ -0.06
CLDN8P56748 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CLDN8P56748 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN8P56748 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN8P56748 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN8P56748 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CLDN8P56748 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN8P56748 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN8P56748 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN8P56748 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN8P56748 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLDN8P56748 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.66□□□□□ -0.06
CLDN8P56748 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN8P56748 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 AC109322.1-201ENST00000524499 1264 ntBASIC14.66□□□□□ -0.06
CLDN8P56748 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CLDN8P56748 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.66□□□□□ -0.06
CLDN8P56748 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN8P56748 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN8P56748 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CLDN8P56748 SNHG9-202ENST00000564014 471 ntBASIC14.66□□□□□ -0.06
CLDN8P56748 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN8P56748 AC000095.1-201ENST00000603208 874 ntBASIC14.66□□□□□ -0.06
CLDN8P56748 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN8P56748 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN8P56748 AC073592.8-201ENST00000624126 511 ntBASIC14.66□□□□□ -0.06
CLDN8P56748 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN8P56748 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CLDN8P56748 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CLDN8P56748 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN8P56748 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN8P56748 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLDN8P56748 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN8P56748 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN8P56748 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLDN8P56748 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN8P56748 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN8P56748 AL359258.3-201ENST00000622910 2331 ntBASIC14.65□□□□□ -0.06
CLDN8P56748 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN8P56748 AC007787.1-201ENST00000588095 1583 ntBASIC14.65□□□□□ -0.06
CLDN8P56748 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN8P56748 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms