Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.03■□□□□ -0
CLCN2P51788 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCN2P51788 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.03■□□□□ -0
CLCN2P51788 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCN2P51788 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCN2P51788 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.03■□□□□ -0
CLCN2P51788 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCN2P51788 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLCN2P51788 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.02■□□□□ -0
CLCN2P51788 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCN2P51788 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.02■□□□□ -0
CLCN2P51788 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLCN2P51788 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLCN2P51788 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCN2P51788 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLCN2P51788 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLCN2P51788 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLCN2P51788 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCN2P51788 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCN2P51788 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.02■□□□□ -0
CLCN2P51788 FAM8A3P-201ENST00000427218 844 ntBASIC15.02■□□□□ -0
CLCN2P51788 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLCN2P51788 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.02■□□□□ -0
CLCN2P51788 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.02■□□□□ -0
CLCN2P51788 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.02■□□□□ -0
CLCN2P51788 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.02□□□□□ -0.01
CLCN2P51788 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.02□□□□□ -0.01
CLCN2P51788 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLCN2P51788 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.02□□□□□ -0.01
CLCN2P51788 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
CLCN2P51788 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.02□□□□□ -0.01
CLCN2P51788 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CLCN2P51788 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCN2P51788 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCN2P51788 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
CLCN2P51788 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
CLCN2P51788 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.02□□□□□ -0.01
CLCN2P51788 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCN2P51788 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.02□□□□□ -0.01
CLCN2P51788 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCN2P51788 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCN2P51788 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCN2P51788 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCN2P51788 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCN2P51788 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.02□□□□□ -0.01
CLCN2P51788 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLCN2P51788 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.01□□□□□ -0.01
CLCN2P51788 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CLCN2P51788 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLCN2P51788 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLCN2P51788 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 BCRP1-201ENST00000444246 691 ntBASIC15.01□□□□□ -0.01
CLCN2P51788 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 AL079307.3-201ENST00000556114 283 ntBASIC15.01□□□□□ -0.01
CLCN2P51788 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 AL133215.2-201ENST00000609242 977 ntBASIC15.01□□□□□ -0.01
CLCN2P51788 AJ011932.1-201ENST00000621707 465 ntBASIC15.01□□□□□ -0.01
CLCN2P51788 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLCN2P51788 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CLCN2P51788 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.01□□□□□ -0.01
CLCN2P51788 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLCN2P51788 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCN2P51788 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCN2P51788 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms