Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.81□□□□□ -0.04
HLCSP50747 AL512361.1-201ENST00000554200 418 ntBASIC14.81□□□□□ -0.04
HLCSP50747 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.81□□□□□ -0.04
HLCSP50747 AC010336.2-201ENST00000564226 506 ntBASIC14.81□□□□□ -0.04
HLCSP50747 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.81□□□□□ -0.04
HLCSP50747 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HLCSP50747 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 AC004233.3-201ENST00000607794 1269 ntBASIC14.81□□□□□ -0.04
HLCSP50747 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.81□□□□□ -0.04
HLCSP50747 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.81□□□□□ -0.04
HLCSP50747 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.81□□□□□ -0.04
HLCSP50747 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.81□□□□□ -0.04
HLCSP50747 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HLCSP50747 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HLCSP50747 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.81□□□□□ -0.04
HLCSP50747 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.81□□□□□ -0.04
HLCSP50747 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLCSP50747 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.81□□□□□ -0.04
HLCSP50747 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.8□□□□□ -0.04
HLCSP50747 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.8□□□□□ -0.04
HLCSP50747 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.8□□□□□ -0.04
HLCSP50747 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.8□□□□□ -0.04
HLCSP50747 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.8□□□□□ -0.04
HLCSP50747 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
HLCSP50747 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLCSP50747 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 PIN1P1-201ENST00000412108 996 ntBASIC14.8□□□□□ -0.04
HLCSP50747 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
HLCSP50747 SPTLC1P1-201ENST00000447199 261 ntBASIC14.8□□□□□ -0.04
HLCSP50747 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.8□□□□□ -0.04
HLCSP50747 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.8□□□□□ -0.04
HLCSP50747 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.8□□□□□ -0.04
HLCSP50747 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.8□□□□□ -0.04
HLCSP50747 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.8□□□□□ -0.04
HLCSP50747 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 KRT8P44-201ENST00000441609 1350 ntBASIC14.8□□□□□ -0.04
HLCSP50747 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLCSP50747 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
HLCSP50747 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLCSP50747 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.8□□□□□ -0.04
HLCSP50747 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLCSP50747 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HLCSP50747 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HLCSP50747 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.79□□□□□ -0.04
HLCSP50747 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.79□□□□□ -0.04
HLCSP50747 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLCSP50747 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HLCSP50747 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.79□□□□□ -0.04
HLCSP50747 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLCSP50747 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.79□□□□□ -0.04
HLCSP50747 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLCSP50747 AC015922.1-201ENST00000421102 1152 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms