Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.97■□□□□ 0.31
CENPFP49454 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.97■□□□□ 0.31
CENPFP49454 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.97■□□□□ 0.31
CENPFP49454 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CENPFP49454 FAM58BP-201ENST00000439056 645 ntBASIC16.97■□□□□ 0.31
CENPFP49454 DUX4L46-201ENST00000566845 751 ntBASIC16.97■□□□□ 0.31
CENPFP49454 AC002472.4-201ENST00000641915 272 ntBASIC16.97■□□□□ 0.31
CENPFP49454 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPFP49454 NKILA-202ENST00000614771 2598 ntBASIC16.97■□□□□ 0.31
CENPFP49454 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.97■□□□□ 0.31
CENPFP49454 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CENPFP49454 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPFP49454 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.97■□□□□ 0.31
CENPFP49454 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPFP49454 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CENPFP49454 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CENPFP49454 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CENPFP49454 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CENPFP49454 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.97■□□□□ 0.31
CENPFP49454 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.97■□□□□ 0.31
CENPFP49454 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPFP49454 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.97■□□□□ 0.31
CENPFP49454 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CENPFP49454 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.97■□□□□ 0.31
CENPFP49454 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
CENPFP49454 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPFP49454 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPFP49454 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.97■□□□□ 0.31
CENPFP49454 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.97■□□□□ 0.31
CENPFP49454 FAM90A7P-201ENST00000382628 1395 ntBASIC16.97■□□□□ 0.31
CENPFP49454 FAM90A23P-201ENST00000400136 1395 ntBASIC16.97■□□□□ 0.31
CENPFP49454 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CENPFP49454 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.97■□□□□ 0.31
CENPFP49454 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CENPFP49454 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.96■□□□□ 0.31
CENPFP49454 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 KLF2P1-201ENST00000447438 1042 ntBASIC16.96■□□□□ 0.31
CENPFP49454 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.96■□□□□ 0.31
CENPFP49454 AC011247.3-201ENST00000603297 438 ntBASIC16.96■□□□□ 0.31
CENPFP49454 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CENPFP49454 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.96■□□□□ 0.31
CENPFP49454 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
CENPFP49454 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CENPFP49454 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.96■□□□□ 0.31
CENPFP49454 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.96■□□□□ 0.31
CENPFP49454 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.96■□□□□ 0.31
CENPFP49454 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CENPFP49454 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CENPFP49454 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.96■□□□□ 0.31
CENPFP49454 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.96■□□□□ 0.31
CENPFP49454 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CENPFP49454 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.96■□□□□ 0.31
CENPFP49454 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CENPFP49454 AC012073.1-201ENST00000606114 1108 ntBASIC16.96■□□□□ 0.31
CENPFP49454 AC138466.5-201ENST00000624002 808 ntBASIC16.96■□□□□ 0.31
CENPFP49454 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.96■□□□□ 0.3
CENPFP49454 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.96■□□□□ 0.3
CENPFP49454 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.96■□□□□ 0.3
CENPFP49454 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.96■□□□□ 0.3
CENPFP49454 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.96■□□□□ 0.3
CENPFP49454 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.95■□□□□ 0.3
CENPFP49454 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.95■□□□□ 0.3
CENPFP49454 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.95■□□□□ 0.3
CENPFP49454 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.95■□□□□ 0.3
CENPFP49454 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.95■□□□□ 0.3
CENPFP49454 AC024909.3-201ENST00000611513 2257 ntBASIC16.95■□□□□ 0.3
CENPFP49454 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.95■□□□□ 0.3
CENPFP49454 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.95■□□□□ 0.3
CENPFP49454 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CENPFP49454 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.95■□□□□ 0.3
CENPFP49454 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CENPFP49454 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.95■□□□□ 0.3
CENPFP49454 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.95■□□□□ 0.3
CENPFP49454 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.95■□□□□ 0.3
CENPFP49454 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 AC024293.1-201ENST00000467930 498 ntBASIC16.95■□□□□ 0.3
CENPFP49454 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.95■□□□□ 0.3
CENPFP49454 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.95■□□□□ 0.3
CENPFP49454 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPFP49454 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CENPFP49454 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms