Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.61□□□□□ -0.23
CX3CR1P49238 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.61□□□□□ -0.23
CX3CR1P49238 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.61□□□□□ -0.23
CX3CR1P49238 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.61□□□□□ -0.23
CX3CR1P49238 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.61□□□□□ -0.23
CX3CR1P49238 RN7SL618P-201ENST00000477850 296 ntBASIC13.61□□□□□ -0.23
CX3CR1P49238 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.61□□□□□ -0.23
CX3CR1P49238 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CX3CR1P49238 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.61□□□□□ -0.23
CX3CR1P49238 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.61□□□□□ -0.23
CX3CR1P49238 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.61□□□□□ -0.23
CX3CR1P49238 TEX28P1-201ENST00000613479 1221 ntBASIC13.61□□□□□ -0.23
CX3CR1P49238 TEX28P2-201ENST00000617764 1221 ntBASIC13.61□□□□□ -0.23
CX3CR1P49238 AC079781.4-201ENST00000641908 219 ntBASIC13.61□□□□□ -0.23
CX3CR1P49238 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CX3CR1P49238 TUBB3P1-201ENST00000405796 1332 ntBASIC13.61□□□□□ -0.23
CX3CR1P49238 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CR1P49238 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CR1P49238 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CX3CR1P49238 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CR1P49238 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 AC138969.2-201ENST00000532739 9932 ntBASIC13.6□□□□□ -0.23
CX3CR1P49238 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CX3CR1P49238 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 AL139400.1-201ENST00000366220 510 ntBASIC13.6□□□□□ -0.23
CX3CR1P49238 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CX3CR1P49238 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CR1P49238 KRT18P64-201ENST00000434946 1219 ntBASIC13.6□□□□□ -0.23
CX3CR1P49238 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 AC004449.1-201ENST00000564240 433 ntBASIC13.6□□□□□ -0.23
CX3CR1P49238 AC015910.1-201ENST00000579400 975 ntBASIC13.6□□□□□ -0.23
CX3CR1P49238 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 AL138828.2-201ENST00000615812 383 ntBASIC13.6□□□□□ -0.23
CX3CR1P49238 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.6□□□□□ -0.23
CX3CR1P49238 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.6□□□□□ -0.23
CX3CR1P49238 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CR1P49238 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CR1P49238 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms