Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC1A3P43003 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A3P43003 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A3P43003 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC1A3P43003 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SLC1A3P43003 AL359258.3-201ENST00000622910 2331 ntBASIC14.24□□□□□ -0.13
SLC1A3P43003 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A3P43003 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A3P43003 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SLC1A3P43003 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 AL133267.1-201ENST00000398220 340 ntBASIC14.23□□□□□ -0.13
SLC1A3P43003 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC1A3P43003 TOMM22P5-201ENST00000416399 439 ntBASIC14.23□□□□□ -0.13
SLC1A3P43003 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 KRT18P64-201ENST00000434946 1219 ntBASIC14.23□□□□□ -0.13
SLC1A3P43003 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC1A3P43003 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 AC044860.1-202ENST00000559481 777 ntBASIC14.23□□□□□ -0.13
SLC1A3P43003 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC1A3P43003 LINC01115-203ENST00000606068 577 ntBASIC14.23□□□□□ -0.13
SLC1A3P43003 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 AF228730.6-201ENST00000641497 218 ntBASIC14.23□□□□□ -0.13
SLC1A3P43003 AC084121.3-201ENST00000641716 218 ntBASIC14.23□□□□□ -0.13
SLC1A3P43003 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.23□□□□□ -0.13
SLC1A3P43003 BTBD7P1-201ENST00000447253 1453 ntBASIC14.23□□□□□ -0.13
SLC1A3P43003 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SLC1A3P43003 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLC1A3P43003 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC1A3P43003 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A3P43003 OR2I1P-210ENST00000642037 4691 ntBASIC14.23□□□□□ -0.13
SLC1A3P43003 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A3P43003 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A3P43003 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SLC1A3P43003 AC148477.4-201ENST00000613430 1793 ntBASIC14.22□□□□□ -0.13
SLC1A3P43003 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC1A3P43003 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC1A3P43003 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms