Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 SLC7A15P-201ENST00000424028 1363 ntBASIC12.64□□□□□ -0.39
CEACAM3P40198 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.64□□□□□ -0.39
CEACAM3P40198 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.64□□□□□ -0.39
CEACAM3P40198 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CEACAM3P40198 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
CEACAM3P40198 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.64□□□□□ -0.39
CEACAM3P40198 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 AC090616.6-203ENST00000579186 1945 ntBASIC12.64□□□□□ -0.39
CEACAM3P40198 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 AC084364.1-201ENST00000551967 1556 ntBASIC12.64□□□□□ -0.39
CEACAM3P40198 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CEACAM3P40198 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.64□□□□□ -0.39
CEACAM3P40198 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.63□□□□□ -0.39
CEACAM3P40198 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.63□□□□□ -0.39
CEACAM3P40198 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.63□□□□□ -0.39
CEACAM3P40198 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.63□□□□□ -0.39
CEACAM3P40198 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CEACAM3P40198 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 AC236430.1-201ENST00000402231 743 ntBASIC12.63□□□□□ -0.39
CEACAM3P40198 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.63□□□□□ -0.39
CEACAM3P40198 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.63□□□□□ -0.39
CEACAM3P40198 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 SPDYE18-201ENST00000510091 1050 ntBASIC12.63□□□□□ -0.39
CEACAM3P40198 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.63□□□□□ -0.39
CEACAM3P40198 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.63□□□□□ -0.39
CEACAM3P40198 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.63□□□□□ -0.39
CEACAM3P40198 AC023310.3-201ENST00000557027 670 ntBASIC12.63□□□□□ -0.39
CEACAM3P40198 AC100756.1-201ENST00000562736 682 ntBASIC12.63□□□□□ -0.39
CEACAM3P40198 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 AC138749.3-201ENST00000567691 622 ntBASIC12.63□□□□□ -0.39
CEACAM3P40198 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.63□□□□□ -0.39
CEACAM3P40198 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CEACAM3P40198 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.63□□□□□ -0.39
CEACAM3P40198 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.63□□□□□ -0.39
CEACAM3P40198 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.63□□□□□ -0.39
CEACAM3P40198 AC093726.1-201ENST00000608064 963 ntBASIC12.63□□□□□ -0.39
CEACAM3P40198 AC116165.1-201ENST00000611806 668 ntBASIC12.63□□□□□ -0.39
CEACAM3P40198 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.63□□□□□ -0.39
CEACAM3P40198 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CEACAM3P40198 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.63□□□□□ -0.39
CEACAM3P40198 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CEACAM3P40198 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CEACAM3P40198 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.62□□□□□ -0.39
CEACAM3P40198 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.62□□□□□ -0.39
CEACAM3P40198 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CEACAM3P40198 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms