Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL15A1P39059 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.26■□□□□ 0.67
COL15A1P39059 AC011742.3-201ENST00000439053 820 ntBASIC19.26■□□□□ 0.67
COL15A1P39059 AC021723.1-201ENST00000486306 515 ntBASIC19.26■□□□□ 0.67
COL15A1P39059 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.26■□□□□ 0.67
COL15A1P39059 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.26■□□□□ 0.67
COL15A1P39059 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.26■□□□□ 0.67
COL15A1P39059 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.26■□□□□ 0.67
COL15A1P39059 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.26■□□□□ 0.67
COL15A1P39059 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.26■□□□□ 0.67
COL15A1P39059 MIR6727-201ENST00000620702 65 ntBASIC19.26■□□□□ 0.67
COL15A1P39059 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COL15A1P39059 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.26■□□□□ 0.67
COL15A1P39059 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL15A1P39059 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
COL15A1P39059 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.25■□□□□ 0.67
COL15A1P39059 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL15A1P39059 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL15A1P39059 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.25■□□□□ 0.67
COL15A1P39059 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.25■□□□□ 0.67
COL15A1P39059 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL15A1P39059 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL15A1P39059 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.25■□□□□ 0.67
COL15A1P39059 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.25■□□□□ 0.67
COL15A1P39059 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.25■□□□□ 0.67
COL15A1P39059 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.25■□□□□ 0.67
COL15A1P39059 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.25■□□□□ 0.67
COL15A1P39059 MIR3907-201ENST00000579424 151 ntBASIC19.25■□□□□ 0.67
COL15A1P39059 MIR4683-201ENST00000579659 81 ntBASIC19.25■□□□□ 0.67
COL15A1P39059 SPCS2P2-201ENST00000603270 608 ntBASIC19.25■□□□□ 0.67
COL15A1P39059 AC079336.7-201ENST00000623428 1078 ntBASIC19.25■□□□□ 0.67
COL15A1P39059 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.25■□□□□ 0.67
COL15A1P39059 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL15A1P39059 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.25■□□□□ 0.67
COL15A1P39059 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 OR6D1P-202ENST00000641007 5290 ntBASIC19.25■□□□□ 0.67
COL15A1P39059 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.25■□□□□ 0.67
COL15A1P39059 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL15A1P39059 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.24■□□□□ 0.67
COL15A1P39059 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL15A1P39059 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL15A1P39059 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.24■□□□□ 0.67
COL15A1P39059 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.24■□□□□ 0.67
COL15A1P39059 RN7SKP175-201ENST00000408472 289 ntBASIC19.24■□□□□ 0.67
COL15A1P39059 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.24■□□□□ 0.67
COL15A1P39059 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.24■□□□□ 0.67
COL15A1P39059 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.24■□□□□ 0.67
COL15A1P39059 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.24■□□□□ 0.67
COL15A1P39059 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.24■□□□□ 0.67
COL15A1P39059 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 AC100757.4-201ENST00000626934 759 ntBASIC19.24■□□□□ 0.67
COL15A1P39059 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.24■□□□□ 0.67
COL15A1P39059 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 AP000593.2-201ENST00000542775 1433 ntBASIC19.24■□□□□ 0.67
COL15A1P39059 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL15A1P39059 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL15A1P39059 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms