Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.75□□□□□ -0.05
LAMA1P25391 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.75□□□□□ -0.05
LAMA1P25391 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMA1P25391 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.75□□□□□ -0.05
LAMA1P25391 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMA1P25391 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
LAMA1P25391 AC127024.7-201ENST00000625101 200 ntBASIC14.75□□□□□ -0.05
LAMA1P25391 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMA1P25391 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.75□□□□□ -0.05
LAMA1P25391 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMA1P25391 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.75□□□□□ -0.05
LAMA1P25391 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.75□□□□□ -0.05
LAMA1P25391 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LAMA1P25391 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMA1P25391 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMA1P25391 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMA1P25391 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
LAMA1P25391 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMA1P25391 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LAMA1P25391 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMA1P25391 AC244394.1-201ENST00000435000 1665 ntBASIC14.75□□□□□ -0.05
LAMA1P25391 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LAMA1P25391 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LAMA1P25391 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.75□□□□□ -0.05
LAMA1P25391 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.75□□□□□ -0.05
LAMA1P25391 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 OR2K2-202ENST00000374428 1038 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.74□□□□□ -0.05
LAMA1P25391 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LAMA1P25391 AC005618.3-201ENST00000624928 458 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 AC006453.1-201ENST00000636037 1257 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 AL645728.2-202ENST00000641679 227 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 SHC1P1-201ENST00000425230 1745 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 AC004066.1-201ENST00000502488 802 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 AC008805.1-201ENST00000590892 364 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LAMA1P25391 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.74□□□□□ -0.05
LAMA1P25391 AC022616.1-201ENST00000518688 554 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.74□□□□□ -0.05
LAMA1P25391 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.74□□□□□ -0.05
LAMA1P25391 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 SNORD3B-2-202ENST00000571722 791 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 AL603764.1-201ENST00000636452 321 ntBASIC14.74□□□□□ -0.05
LAMA1P25391 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LAMA1P25391 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
LAMA1P25391 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
LAMA1P25391 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LAMA1P25391 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LAMA1P25391 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LAMA1P25391 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LAMA1P25391 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LAMA1P25391 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.73□□□□□ -0.05
LAMA1P25391 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.73□□□□□ -0.05
LAMA1P25391 NOC2LP1-201ENST00000450578 752 ntBASIC14.73□□□□□ -0.05
LAMA1P25391 RN7SL258P-201ENST00000478664 300 ntBASIC14.73□□□□□ -0.05
LAMA1P25391 AP002803.1-201ENST00000528836 498 ntBASIC14.73□□□□□ -0.05
LAMA1P25391 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.73□□□□□ -0.05
LAMA1P25391 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LAMA1P25391 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.73□□□□□ -0.05
LAMA1P25391 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.73□□□□□ -0.05
LAMA1P25391 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.73□□□□□ -0.05
LAMA1P25391 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.73□□□□□ -0.05
LAMA1P25391 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.73□□□□□ -0.05
LAMA1P25391 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms