Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.12□□□□□ -0.31
VAMP1P23763 MRPL20P1-201ENST00000400819 433 ntBASIC13.12□□□□□ -0.31
VAMP1P23763 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
VAMP1P23763 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.12□□□□□ -0.31
VAMP1P23763 FGFR3P6-201ENST00000457012 610 ntBASIC13.12□□□□□ -0.31
VAMP1P23763 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.12□□□□□ -0.31
VAMP1P23763 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.12□□□□□ -0.31
VAMP1P23763 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.12□□□□□ -0.31
VAMP1P23763 AL031432.2-201ENST00000566714 459 ntBASIC13.12□□□□□ -0.31
VAMP1P23763 AC002347.1-201ENST00000569543 541 ntBASIC13.12□□□□□ -0.31
VAMP1P23763 AL928711.1-201ENST00000570165 459 ntBASIC13.12□□□□□ -0.31
VAMP1P23763 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.12□□□□□ -0.31
VAMP1P23763 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 AC025062.2-201ENST00000605477 670 ntBASIC13.12□□□□□ -0.31
VAMP1P23763 AC008608.2-201ENST00000606089 416 ntBASIC13.12□□□□□ -0.31
VAMP1P23763 ACTL9-202ENST00000612068 1252 ntBASIC13.12□□□□□ -0.31
VAMP1P23763 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.12□□□□□ -0.31
VAMP1P23763 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 AC136759.1-202ENST00000530858 2194 ntBASIC13.12□□□□□ -0.31
VAMP1P23763 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.12□□□□□ -0.31
VAMP1P23763 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.12□□□□□ -0.31
VAMP1P23763 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.12□□□□□ -0.31
VAMP1P23763 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.12□□□□□ -0.31
VAMP1P23763 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VAMP1P23763 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.12□□□□□ -0.31
VAMP1P23763 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
VAMP1P23763 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.11□□□□□ -0.31
VAMP1P23763 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VAMP1P23763 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.11□□□□□ -0.31
VAMP1P23763 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.11□□□□□ -0.31
VAMP1P23763 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.11□□□□□ -0.31
VAMP1P23763 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.11□□□□□ -0.31
VAMP1P23763 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.11□□□□□ -0.31
VAMP1P23763 AC107918.4-202ENST00000641623 219 ntBASIC13.11□□□□□ -0.31
VAMP1P23763 AL645728.2-201ENST00000641974 660 ntBASIC13.11□□□□□ -0.31
VAMP1P23763 AC097359.2-201ENST00000604992 2389 ntBASIC13.11□□□□□ -0.31
VAMP1P23763 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.11□□□□□ -0.31
VAMP1P23763 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VAMP1P23763 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VAMP1P23763 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.11□□□□□ -0.31
VAMP1P23763 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.11□□□□□ -0.31
VAMP1P23763 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
VAMP1P23763 BNIP3P1-202ENST00000550043 1585 ntBASIC13.11□□□□□ -0.31
VAMP1P23763 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP1P23763 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP1P23763 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
VAMP1P23763 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP1P23763 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VAMP1P23763 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.1□□□□□ -0.31
VAMP1P23763 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP1P23763 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.1□□□□□ -0.31
VAMP1P23763 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms