Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL1P22362 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL1P22362 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CCL1P22362 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL1P22362 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
CCL1P22362 MTHFR-210ENST00000641407 2387 ntBASIC13.25□□□□□ -0.29
CCL1P22362 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 AC068587.6-202ENST00000641839 5619 ntBASIC13.25□□□□□ -0.29
CCL1P22362 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL1P22362 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL1P22362 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 AC009477.1-201ENST00000452936 217 ntBASIC13.25□□□□□ -0.29
CCL1P22362 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.25□□□□□ -0.29
CCL1P22362 AC097493.3-201ENST00000509725 367 ntBASIC13.25□□□□□ -0.29
CCL1P22362 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CCL1P22362 AC004449.1-201ENST00000564240 433 ntBASIC13.25□□□□□ -0.29
CCL1P22362 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.25□□□□□ -0.29
CCL1P22362 AL590560.3-201ENST00000623350 461 ntBASIC13.25□□□□□ -0.29
CCL1P22362 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL1P22362 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL1P22362 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL1P22362 GRK6P1-201ENST00000400595 1711 ntBASIC13.25□□□□□ -0.29
CCL1P22362 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 AC018529.2-202ENST00000611482 3087 ntBASIC13.24□□□□□ -0.29
CCL1P22362 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CCL1P22362 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CCL1P22362 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.24□□□□□ -0.29
CCL1P22362 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL1P22362 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL1P22362 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 AC113367.3-201ENST00000508316 1912 ntBASIC13.24□□□□□ -0.29
CCL1P22362 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL1P22362 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL1P22362 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.24□□□□□ -0.29
CCL1P22362 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
CCL1P22362 TSSK5P-201ENST00000423978 907 ntBASIC13.24□□□□□ -0.29
CCL1P22362 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.24□□□□□ -0.29
CCL1P22362 MEIS3P1-201ENST00000495167 958 ntBASIC13.24□□□□□ -0.29
CCL1P22362 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL1P22362 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms