Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 AL359881.2-201ENST00000602973 570 ntBASIC17.7■□□□□ 0.42
SCG2P13521 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCG2P13521 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.7■□□□□ 0.42
SCG2P13521 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.7■□□□□ 0.42
SCG2P13521 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.7■□□□□ 0.42
SCG2P13521 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SCG2P13521 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCG2P13521 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SCG2P13521 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG2P13521 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG2P13521 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.69■□□□□ 0.42
SCG2P13521 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCG2P13521 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SCG2P13521 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCG2P13521 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG2P13521 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCG2P13521 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCG2P13521 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.69■□□□□ 0.42
SCG2P13521 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SCG2P13521 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SCG2P13521 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCG2P13521 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG2P13521 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.69■□□□□ 0.42
SCG2P13521 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.69■□□□□ 0.42
SCG2P13521 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG2P13521 PRSS30P-206ENST00000641773 873 ntBASIC17.69■□□□□ 0.42
SCG2P13521 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG2P13521 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCG2P13521 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SCG2P13521 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG2P13521 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCG2P13521 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCG2P13521 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG2P13521 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 REXO1L2P-201ENST00000425429 2069 ntBASIC17.68■□□□□ 0.42
SCG2P13521 AGAP7P-201ENST00000582299 2062 ntBASIC17.68■□□□□ 0.42
SCG2P13521 AGAP14-201ENST00000624701 2060 ntBASIC17.68■□□□□ 0.42
SCG2P13521 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 TCAF2P1-201ENST00000291129 2421 ntBASIC17.68■□□□□ 0.42
SCG2P13521 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.68■□□□□ 0.42
SCG2P13521 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCG2P13521 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.68■□□□□ 0.42
SCG2P13521 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 NUS1P3-201ENST00000423502 862 ntBASIC17.68■□□□□ 0.42
SCG2P13521 AC007274.1-201ENST00000439805 662 ntBASIC17.68■□□□□ 0.42
SCG2P13521 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.68■□□□□ 0.42
SCG2P13521 RN7SL837P-201ENST00000463010 287 ntBASIC17.68■□□□□ 0.42
SCG2P13521 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SCG2P13521 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.68■□□□□ 0.42
SCG2P13521 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SCG2P13521 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.68■□□□□ 0.42
SCG2P13521 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCG2P13521 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCG2P13521 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.68■□□□□ 0.42
SCG2P13521 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms