Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.24■□□□□ 0.03
RBP1P09455 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 SBF1P1-201ENST00000444527 5631 ntBASIC15.24■□□□□ 0.03
RBP1P09455 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RBP1P09455 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RBP1P09455 TOMM22P5-201ENST00000416399 439 ntBASIC15.24■□□□□ 0.03
RBP1P09455 AC254562.1-201ENST00000417586 456 ntBASIC15.24■□□□□ 0.03
RBP1P09455 BX842568.4-201ENST00000421222 227 ntBASIC15.24■□□□□ 0.03
RBP1P09455 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.24■□□□□ 0.03
RBP1P09455 KRT18P64-201ENST00000434946 1219 ntBASIC15.24■□□□□ 0.03
RBP1P09455 RPL13P2-201ENST00000440687 659 ntBASIC15.24■□□□□ 0.03
RBP1P09455 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RBP1P09455 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.24■□□□□ 0.03
RBP1P09455 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 AC025181.2-201ENST00000606994 802 ntBASIC15.24■□□□□ 0.03
RBP1P09455 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.24■□□□□ 0.03
RBP1P09455 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.24■□□□□ 0.03
RBP1P09455 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RBP1P09455 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RBP1P09455 AC005089.1-201ENST00000619486 2241 ntBASIC15.24■□□□□ 0.03
RBP1P09455 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.24■□□□□ 0.03
RBP1P09455 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RBP1P09455 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBP1P09455 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RBP1P09455 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 CICP14-201ENST00000629111 2732 ntBASIC15.23■□□□□ 0.03
RBP1P09455 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RBP1P09455 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RBP1P09455 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RBP1P09455 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RBP1P09455 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.23■□□□□ 0.03
RBP1P09455 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.23■□□□□ 0.03
RBP1P09455 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
RBP1P09455 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 AC104457.1-201ENST00000401024 814 ntBASIC15.23■□□□□ 0.03
RBP1P09455 RPL37AP1-201ENST00000412502 279 ntBASIC15.23■□□□□ 0.03
RBP1P09455 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.23■□□□□ 0.03
RBP1P09455 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 KRT18P43-201ENST00000469825 1281 ntBASIC15.23■□□□□ 0.03
RBP1P09455 HLA-V-204ENST00000476601 1289 ntBASIC15.23■□□□□ 0.03
RBP1P09455 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.23■□□□□ 0.03
RBP1P09455 AC069262.1-201ENST00000539058 672 ntBASIC15.23■□□□□ 0.03
RBP1P09455 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.23■□□□□ 0.03
RBP1P09455 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.23■□□□□ 0.03
RBP1P09455 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RBP1P09455 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.23■□□□□ 0.03
RBP1P09455 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.23■□□□□ 0.03
RBP1P09455 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.23■□□□□ 0.03
RBP1P09455 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBP1P09455 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.23■□□□□ 0.03
RBP1P09455 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.23■□□□□ 0.03
RBP1P09455 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms