Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL583805.1-201ENST00000391389 531 ntBASIC19.78■□□□□ 0.76
COL5A2P05997 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL5A2P05997 AC141586.1-203ENST00000567242 366 ntBASIC19.78■□□□□ 0.76
COL5A2P05997 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.78■□□□□ 0.76
COL5A2P05997 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL5A2P05997 AC005618.3-201ENST00000624928 458 ntBASIC19.78■□□□□ 0.76
COL5A2P05997 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.78■□□□□ 0.76
COL5A2P05997 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL5A2P05997 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL5A2P05997 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL5A2P05997 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COL5A2P05997 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL5A2P05997 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL5A2P05997 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
COL5A2P05997 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COL5A2P05997 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.77■□□□□ 0.76
COL5A2P05997 PCDHA14-201ENST00000506751 2298 ntBASIC19.77■□□□□ 0.76
COL5A2P05997 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.77■□□□□ 0.76
COL5A2P05997 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COL5A2P05997 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL5A2P05997 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL5A2P05997 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
COL5A2P05997 TLE1P1-201ENST00000422965 589 ntBASIC19.77■□□□□ 0.76
COL5A2P05997 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC19.77■□□□□ 0.76
COL5A2P05997 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC19.77■□□□□ 0.76
COL5A2P05997 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC19.77■□□□□ 0.76
COL5A2P05997 PIN4P1-201ENST00000451079 396 ntBASIC19.77■□□□□ 0.76
COL5A2P05997 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL5A2P05997 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC19.77■□□□□ 0.76
COL5A2P05997 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.77■□□□□ 0.76
COL5A2P05997 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC19.77■□□□□ 0.76
COL5A2P05997 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC19.77■□□□□ 0.76
COL5A2P05997 AC133540.1-201ENST00000620845 1019 ntBASIC19.77■□□□□ 0.76
COL5A2P05997 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
COL5A2P05997 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC19.77■□□□□ 0.76
COL5A2P05997 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
COL5A2P05997 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.77■□□□□ 0.75
COL5A2P05997 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.77■□□□□ 0.75
COL5A2P05997 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
COL5A2P05997 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL5A2P05997 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.77■□□□□ 0.75
COL5A2P05997 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL5A2P05997 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL5A2P05997 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL5A2P05997 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
COL5A2P05997 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 AC018629.1-201ENST00000623381 1736 ntBASIC19.76■□□□□ 0.75
COL5A2P05997 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
COL5A2P05997 AC012362.1-201ENST00000434906 739 ntBASIC19.76■□□□□ 0.75
COL5A2P05997 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC19.76■□□□□ 0.75
COL5A2P05997 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC19.76■□□□□ 0.75
COL5A2P05997 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC19.76■□□□□ 0.75
COL5A2P05997 AC005357.2-202ENST00000590507 1060 ntBASIC19.76■□□□□ 0.75
COL5A2P05997 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL5A2P05997 AC025262.2-201ENST00000623975 1056 ntBASIC19.76■□□□□ 0.75
COL5A2P05997 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.76■□□□□ 0.75
COL5A2P05997 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.76■□□□□ 0.75
COL5A2P05997 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC19.76■□□□□ 0.75
COL5A2P05997 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
COL5A2P05997 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL5A2P05997 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL5A2P05997 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL5A2P05997 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
COL5A2P05997 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.75■□□□□ 0.75
COL5A2P05997 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC19.75■□□□□ 0.75
COL5A2P05997 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC19.75■□□□□ 0.75
COL5A2P05997 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
COL5A2P05997 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 AC084781.1-201ENST00000613737 656 ntBASIC19.75■□□□□ 0.75
COL5A2P05997 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.75■□□□□ 0.75
COL5A2P05997 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COL5A2P05997 AC073911.3-201ENST00000624401 631 ntBASIC19.75■□□□□ 0.75
COL5A2P05997 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.75■□□□□ 0.75
COL5A2P05997 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.75■□□□□ 0.75
COL5A2P05997 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 AC012508.2-201ENST00000567613 1472 ntBASIC19.75■□□□□ 0.75
COL5A2P05997 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COL5A2P05997 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL5A2P05997 KRT8P31-201ENST00000504812 1408 ntBASIC19.75■□□□□ 0.75
COL5A2P05997 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL5A2P05997 NKILA-202ENST00000614771 2598 ntBASIC19.74■□□□□ 0.75
COL5A2P05997 RNA5SP359-201ENST00000364838 113 ntBASIC19.74■□□□□ 0.75
COL5A2P05997 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL5A2P05997 CHCHD2P9-201ENST00000461726 456 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms