Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.51■□□□□ 0.39
SMC2O95347 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SMC2O95347 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SMC2O95347 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.51■□□□□ 0.39
SMC2O95347 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.51■□□□□ 0.39
SMC2O95347 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.51■□□□□ 0.39
SMC2O95347 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
SMC2O95347 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.51■□□□□ 0.39
SMC2O95347 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SMC2O95347 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.51■□□□□ 0.39
SMC2O95347 AC005912.2-201ENST00000619492 2400 ntBASIC17.51■□□□□ 0.39
SMC2O95347 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.51■□□□□ 0.39
SMC2O95347 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SMC2O95347 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.51■□□□□ 0.39
SMC2O95347 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.51■□□□□ 0.39
SMC2O95347 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.51■□□□□ 0.39
SMC2O95347 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.5■□□□□ 0.39
SMC2O95347 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 AC009093.7-201ENST00000623853 1223 ntBASIC17.5■□□□□ 0.39
SMC2O95347 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 AC117489.1-201ENST00000625169 3217 ntBASIC17.5■□□□□ 0.39
SMC2O95347 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.5■□□□□ 0.39
SMC2O95347 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMC2O95347 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.5■□□□□ 0.39
SMC2O95347 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.49■□□□□ 0.39
SMC2O95347 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.49■□□□□ 0.39
SMC2O95347 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMC2O95347 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
SMC2O95347 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.49■□□□□ 0.39
SMC2O95347 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMC2O95347 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.49■□□□□ 0.39
SMC2O95347 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.49■□□□□ 0.39
SMC2O95347 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.49■□□□□ 0.39
SMC2O95347 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.49■□□□□ 0.39
SMC2O95347 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.49■□□□□ 0.39
SMC2O95347 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.49■□□□□ 0.39
SMC2O95347 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.49■□□□□ 0.39
SMC2O95347 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.49■□□□□ 0.39
SMC2O95347 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.49■□□□□ 0.39
SMC2O95347 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMC2O95347 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms