Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTN3O95197 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN3O95197 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.29■□□□□ 0.2
RTN3O95197 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.29■□□□□ 0.2
RTN3O95197 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTN3O95197 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN3O95197 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.28■□□□□ 0.2
RTN3O95197 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.28■□□□□ 0.2
RTN3O95197 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RTN3O95197 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.28■□□□□ 0.2
RTN3O95197 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN3O95197 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN3O95197 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.28■□□□□ 0.2
RTN3O95197 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.28■□□□□ 0.2
RTN3O95197 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 KRT43P-201ENST00000434019 910 ntBASIC16.28■□□□□ 0.2
RTN3O95197 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.28■□□□□ 0.2
RTN3O95197 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 USP32P1-208ENST00000506594 1164 ntBASIC16.28■□□□□ 0.2
RTN3O95197 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RTN3O95197 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN3O95197 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN3O95197 SLC25A47P1-201ENST00000531577 414 ntBASIC16.28■□□□□ 0.2
RTN3O95197 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.28■□□□□ 0.2
RTN3O95197 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN3O95197 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN3O95197 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN3O95197 CLUHP6-201ENST00000580789 941 ntBASIC16.28■□□□□ 0.2
RTN3O95197 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.28■□□□□ 0.2
RTN3O95197 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN3O95197 AC084364.1-201ENST00000551967 1556 ntBASIC16.28■□□□□ 0.2
RTN3O95197 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN3O95197 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN3O95197 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.27■□□□□ 0.2
RTN3O95197 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RTN3O95197 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RTN3O95197 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.27■□□□□ 0.2
RTN3O95197 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.27■□□□□ 0.2
RTN3O95197 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.27■□□□□ 0.2
RTN3O95197 ACKR1-201ENST00000368121 1240 ntBASIC16.27■□□□□ 0.2
RTN3O95197 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 RPL5P21-201ENST00000404620 815 ntBASIC16.27■□□□□ 0.2
RTN3O95197 ARSEP1-201ENST00000420443 635 ntBASIC16.27■□□□□ 0.2
RTN3O95197 AC112492.5-201ENST00000421897 457 ntBASIC16.27■□□□□ 0.2
RTN3O95197 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 ACA64.2-201ENST00000459014 129 ntBASIC16.27■□□□□ 0.2
RTN3O95197 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RTN3O95197 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.27■□□□□ 0.2
RTN3O95197 AC068587.3-201ENST00000526613 355 ntBASIC16.27■□□□□ 0.2
RTN3O95197 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.27■□□□□ 0.2
RTN3O95197 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.27■□□□□ 0.2
RTN3O95197 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.27■□□□□ 0.2
RTN3O95197 AC005252.2-201ENST00000624630 1141 ntBASIC16.27■□□□□ 0.2
RTN3O95197 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RTN3O95197 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN3O95197 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RTN3O95197 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN3O95197 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RTN3O95197 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN3O95197 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN3O95197 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms