Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TSPAN4O14817 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.1□□□□□ -0.31
TSPAN4O14817 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.1□□□□□ -0.31
TSPAN4O14817 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TSPAN4O14817 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.1□□□□□ -0.31
TSPAN4O14817 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.1□□□□□ -0.31
TSPAN4O14817 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.1□□□□□ -0.31
TSPAN4O14817 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.1□□□□□ -0.31
TSPAN4O14817 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.1□□□□□ -0.31
TSPAN4O14817 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.1□□□□□ -0.31
TSPAN4O14817 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.1□□□□□ -0.31
TSPAN4O14817 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.1□□□□□ -0.31
TSPAN4O14817 NKAPP1-205ENST00000585790 367 ntBASIC13.1□□□□□ -0.31
TSPAN4O14817 AC064862.7-201ENST00000604520 867 ntBASIC13.1□□□□□ -0.31
TSPAN4O14817 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
TSPAN4O14817 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TSPAN4O14817 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TSPAN4O14817 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
TSPAN4O14817 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TSPAN4O14817 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.1□□□□□ -0.31
TSPAN4O14817 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TSPAN4O14817 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 MEX3B-202ENST00000558133 4333 ntBASIC13.09□□□□□ -0.31
TSPAN4O14817 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.09□□□□□ -0.31
TSPAN4O14817 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 STRCP1-201ENST00000509801 5328 ntBASIC13.09□□□□□ -0.31
TSPAN4O14817 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TSPAN4O14817 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TSPAN4O14817 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.09□□□□□ -0.31
TSPAN4O14817 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.09□□□□□ -0.31
TSPAN4O14817 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 AC073648.2-201ENST00000510116 352 ntBASIC13.09□□□□□ -0.31
TSPAN4O14817 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.09□□□□□ -0.31
TSPAN4O14817 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.09□□□□□ -0.31
TSPAN4O14817 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TSPAN4O14817 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TSPAN4O14817 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 BX640514.1-201ENST00000583223 1918 ntBASIC13.09□□□□□ -0.31
TSPAN4O14817 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.09□□□□□ -0.31
TSPAN4O14817 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.09□□□□□ -0.31
TSPAN4O14817 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.09□□□□□ -0.31
TSPAN4O14817 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TSPAN4O14817 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TSPAN4O14817 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TSPAN4O14817 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.08□□□□□ -0.31
TSPAN4O14817 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TSPAN4O14817 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.08□□□□□ -0.32
TSPAN4O14817 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TSPAN4O14817 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TSPAN4O14817 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TSPAN4O14817 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 282.1 ms