Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.08□□□□□ -0.15
NPIPA3F8WFD2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPA3F8WFD2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 BCRP2-202ENST00000447763 634 ntBASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 BCRP6-201ENST00000510112 632 ntBASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 BCRP7-201ENST00000511549 544 ntBASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 AC124283.3-201ENST00000570869 594 ntBASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 COX11-210ENST00000639671 696 ntBASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA3F8WFD2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 AC105917.1-201ENST00000506637 2539 ntBASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 AC092850.2-201ENST00000623821 2697 ntBASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms