Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 C1QBPP1-201ENST00000400117 770 ntBASIC14.65□□□□□ -0.06
LRIT2A6NDA9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.65□□□□□ -0.06
LRIT2A6NDA9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 AL359711.2-201ENST00000563105 872 ntBASIC14.65□□□□□ -0.06
LRIT2A6NDA9 AC124283.3-201ENST00000570869 594 ntBASIC14.65□□□□□ -0.06
LRIT2A6NDA9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 AC133539.2-201ENST00000604757 467 ntBASIC14.65□□□□□ -0.06
LRIT2A6NDA9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 AC093525.8-201ENST00000624099 1342 ntBASIC14.65□□□□□ -0.06
LRIT2A6NDA9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRIT2A6NDA9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.64□□□□□ -0.07
LRIT2A6NDA9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 MIR3197-201ENST00000582241 73 ntBASIC14.64□□□□□ -0.07
LRIT2A6NDA9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 AL359258.3-201ENST00000622910 2331 ntBASIC14.64□□□□□ -0.07
LRIT2A6NDA9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRIT2A6NDA9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms