Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 REXO1L2P-201ENST00000425429 2069 ntBASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAV5A0A0B4J249 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 RPL5P21-201ENST00000404620 815 ntBASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AC136604.1-201ENST00000418535 575 ntBASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AP000842.3-202ENST00000569238 1080 ntBASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AC026979.3-201ENST00000607315 403 ntBASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 AP000845.1-201ENST00000581677 2131 ntBASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
TRAV5A0A0B4J249 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 BX640514.1-201ENST00000583223 1918 ntBASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 AC018529.2-202ENST00000611482 3087 ntBASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 MIR346-201ENST00000362234 95 ntBASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 SPCS2P4-201ENST00000436160 681 ntBASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 RPL13AP23-201ENST00000480739 586 ntBASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 AL662844.1-201ENST00000546340 181 ntBASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 AC243562.1-201ENST00000560672 389 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms