Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 C2orf27AP3-201ENST00000434123 579 ntBASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 KRT18P43-201ENST00000469825 1281 ntBASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 KRT90P-201ENST00000549264 1064 ntBASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 AL354718.3-201ENST00000616414 581 ntBASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 CR382287.1-201ENST00000623954 586 ntBASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 AC008687.7-202ENST00000637404 953 ntBASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA9Q9Y5G4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 PPT1-215ENST00000641471 2368 ntBASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 AC022137.2-201ENST00000503482 481 ntBASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA9Q9Y5G4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms