Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 AL391280.1-201ENST00000506969 1062 ntBASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 AC073413.1-201ENST00000603927 732 ntBASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 AC106872.11-201ENST00000605838 421 ntBASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHB7Q9Y5E2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 AC092127.1-201ENST00000567093 3455 ntBASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 AL662890.1-201ENST00000396818 632 ntBASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 HIST2H2BC-201ENST00000498492 580 ntBASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 AC055811.4-201ENST00000624039 1754 ntBASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB7Q9Y5E2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PCDHB7Q9Y5E2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms