Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 FAM90A25P-201ENST00000528404 1395 ntBASIC17.25■□□□□ 0.35
TRIM17Q9Y577 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM17Q9Y577 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM17Q9Y577 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM17Q9Y577 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM17Q9Y577 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM17Q9Y577 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 AC018695.7-201ENST00000624587 2492 ntBASIC17.24■□□□□ 0.35
TRIM17Q9Y577 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 AC239868.1-201ENST00000369385 493 ntBASIC17.24■□□□□ 0.35
TRIM17Q9Y577 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 AL592076.1-201ENST00000424448 303 ntBASIC17.24■□□□□ 0.35
TRIM17Q9Y577 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 MESTP3-201ENST00000503460 968 ntBASIC17.24■□□□□ 0.35
TRIM17Q9Y577 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 AC026803.1-201ENST00000569130 274 ntBASIC17.24■□□□□ 0.35
TRIM17Q9Y577 MIR4313-201ENST00000580760 101 ntBASIC17.24■□□□□ 0.35
TRIM17Q9Y577 AC008805.1-201ENST00000590892 364 ntBASIC17.24■□□□□ 0.35
TRIM17Q9Y577 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 MIR6858-201ENST00000620733 67 ntBASIC17.24■□□□□ 0.35
TRIM17Q9Y577 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
TRIM17Q9Y577 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 FKBP4P6-201ENST00000457486 1332 ntBASIC17.23■□□□□ 0.35
TRIM17Q9Y577 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 AC055811.4-201ENST00000624039 1754 ntBASIC17.23■□□□□ 0.35
TRIM17Q9Y577 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 HLA-J-204ENST00000495278 958 ntBASIC17.23■□□□□ 0.35
TRIM17Q9Y577 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 RPL17P45-201ENST00000586289 509 ntBASIC17.23■□□□□ 0.35
TRIM17Q9Y577 AC004466.1-201ENST00000599515 1080 ntBASIC17.23■□□□□ 0.35
TRIM17Q9Y577 AP003392.6-201ENST00000607709 325 ntBASIC17.23■□□□□ 0.35
TRIM17Q9Y577 AL603764.1-201ENST00000636452 321 ntBASIC17.23■□□□□ 0.35
TRIM17Q9Y577 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM17Q9Y577 AC022188.1-201ENST00000620960 1664 ntBASIC17.23■□□□□ 0.35
TRIM17Q9Y577 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms