Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL079307.3-201ENST00000556114 283 ntBASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 AL589739.1-201ENST00000607720 493 ntBASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 AC079781.4-201ENST00000641908 219 ntBASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 FGD5P1-202ENST00000614866 2498 ntBASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 AC232323.1-201ENST00000540724 2099 ntBASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 REXO1L5P-201ENST00000622260 2098 ntBASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RHBDD3Q9Y3P4 KRT8P12-202ENST00000472924 1397 ntBASIC13.58□□□□□ -0.23
RHBDD3Q9Y3P4 AJ011931.1-201ENST00000618749 2492 ntBASIC13.58□□□□□ -0.23
RHBDD3Q9Y3P4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
RHBDD3Q9Y3P4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.58□□□□□ -0.23
RHBDD3Q9Y3P4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.58□□□□□ -0.23
RHBDD3Q9Y3P4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 AL139400.1-201ENST00000366220 510 ntBASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 AC136604.1-201ENST00000418535 575 ntBASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 TSEN15P1-201ENST00000423257 515 ntBASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 AC023511.2-201ENST00000618803 211 ntBASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 ZBED1P1-201ENST00000502364 1930 ntBASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.58□□□□□ -0.24
RHBDD3Q9Y3P4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 CETN4P-206ENST00000642099 2168 ntBASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 SNX18-202ENST00000343017 3140 ntBASIC13.57□□□□□ -0.24
RHBDD3Q9Y3P4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms