Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 RPL5P21-201ENST00000404620 815 ntBASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 LINC01115-203ENST00000606068 577 ntBASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 AC079781.4-201ENST00000641908 219 ntBASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF11Q9Y3C5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 AC125807.1-201ENST00000483097 614 ntBASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 AC025678.2-201ENST00000562061 970 ntBASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF11Q9Y3C5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RNF11Q9Y3C5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RNF11Q9Y3C5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.08■□□□□ 0
RNF11Q9Y3C5 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms