Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC015910.1-201ENST00000579400 975 ntBASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 RPL5P21-201ENST00000404620 815 ntBASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 GNAQP1-201ENST00000444815 1067 ntBASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 RPL13AP25-201ENST00000484130 612 ntBASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 SPDYE18-201ENST00000510091 1050 ntBASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 AL132655.2-201ENST00000596276 594 ntBASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.88□□□□□ -0.19
PARPBPQ9NWS1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 CICP13-201ENST00000422015 2789 ntBASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 AL121723.1-201ENST00000445194 1519 ntBASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 RN7SL399P-201ENST00000471648 279 ntBASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 AC023310.3-201ENST00000557027 670 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms