Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD248Q9HCU0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
CD248Q9HCU0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD248Q9HCU0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD248Q9HCU0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD248Q9HCU0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CD248Q9HCU0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD248Q9HCU0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD248Q9HCU0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.33■□□□□ 0.21
CD248Q9HCU0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CD248Q9HCU0 AL109954.1-202ENST00000564051 2148 ntBASIC16.33■□□□□ 0.21
CD248Q9HCU0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 AL122018.1-201ENST00000446607 2310 ntBASIC16.33■□□□□ 0.2
CD248Q9HCU0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 AC087499.6-201ENST00000411576 835 ntBASIC16.33■□□□□ 0.2
CD248Q9HCU0 KRT17P7-201ENST00000451704 1104 ntBASIC16.33■□□□□ 0.2
CD248Q9HCU0 INE1-201ENST00000456273 945 ntBASIC16.33■□□□□ 0.2
CD248Q9HCU0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 AC008494.3-201ENST00000606615 944 ntBASIC16.33■□□□□ 0.2
CD248Q9HCU0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 NFIC-211ENST00000641145 8399 ntBASIC16.33■□□□□ 0.2
CD248Q9HCU0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD248Q9HCU0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD248Q9HCU0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 AL139010.1-201ENST00000454878 894 ntBASIC16.32■□□□□ 0.2
CD248Q9HCU0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 AL359881.2-201ENST00000602973 570 ntBASIC16.32■□□□□ 0.2
CD248Q9HCU0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 PCGF3-213ENST00000620529 1899 ntBASIC16.32■□□□□ 0.2
CD248Q9HCU0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.32■□□□□ 0.2
CD248Q9HCU0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD248Q9HCU0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms