Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 AC120045.2-201ENST00000567334 178 ntBASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 AC015936.2-201ENST00000593177 259 ntBASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP3Q9BWW4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 GPR53P-205ENST00000457298 1084 ntBASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 ENPP7P5-201ENST00000541031 1031 ntBASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 AC010319.3-201ENST00000597028 470 ntBASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 AC126177.1-201ENST00000547829 2218 ntBASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP3Q9BWW4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms