Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.91■□□□□ 0.3
DUSP9Q99956 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.91■□□□□ 0.3
DUSP9Q99956 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
DUSP9Q99956 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.91■□□□□ 0.3
DUSP9Q99956 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.91■□□□□ 0.3
DUSP9Q99956 MEIS3P1-201ENST00000495167 958 ntBASIC16.91■□□□□ 0.3
DUSP9Q99956 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.91■□□□□ 0.3
DUSP9Q99956 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.91■□□□□ 0.3
DUSP9Q99956 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
DUSP9Q99956 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.91■□□□□ 0.3
DUSP9Q99956 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.91■□□□□ 0.3
DUSP9Q99956 TIMM17BP1-201ENST00000545713 516 ntBASIC16.91■□□□□ 0.3
DUSP9Q99956 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
DUSP9Q99956 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.91■□□□□ 0.3
DUSP9Q99956 SAMD11P1-201ENST00000571429 661 ntBASIC16.91■□□□□ 0.3
DUSP9Q99956 AC138761.1-201ENST00000584393 385 ntBASIC16.91■□□□□ 0.3
DUSP9Q99956 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
DUSP9Q99956 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.91■□□□□ 0.3
DUSP9Q99956 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.91■□□□□ 0.3
DUSP9Q99956 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
DUSP9Q99956 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
DUSP9Q99956 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.91■□□□□ 0.3
DUSP9Q99956 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DUSP9Q99956 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.9■□□□□ 0.3
DUSP9Q99956 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
DUSP9Q99956 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.9■□□□□ 0.3
DUSP9Q99956 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
DUSP9Q99956 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
DUSP9Q99956 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
DUSP9Q99956 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.9■□□□□ 0.3
DUSP9Q99956 AC002472.2-201ENST00000442739 958 ntBASIC16.9■□□□□ 0.3
DUSP9Q99956 TSPY16P-201ENST00000449843 468 ntBASIC16.9■□□□□ 0.3
DUSP9Q99956 IGHV3-42-201ENST00000520410 361 ntBASIC16.9■□□□□ 0.3
DUSP9Q99956 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.9■□□□□ 0.3
DUSP9Q99956 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.9■□□□□ 0.3
DUSP9Q99956 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.9■□□□□ 0.3
DUSP9Q99956 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.9■□□□□ 0.3
DUSP9Q99956 RN7SL204P-201ENST00000582831 262 ntBASIC16.9■□□□□ 0.3
DUSP9Q99956 SRD5A3P1-201ENST00000603021 949 ntBASIC16.9■□□□□ 0.3
DUSP9Q99956 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.9■□□□□ 0.3
DUSP9Q99956 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
DUSP9Q99956 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 BTBD7P1-201ENST00000447253 1453 ntBASIC16.9■□□□□ 0.3
DUSP9Q99956 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
DUSP9Q99956 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.9■□□□□ 0.3
DUSP9Q99956 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
DUSP9Q99956 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
DUSP9Q99956 AC018529.2-202ENST00000611482 3087 ntBASIC16.9■□□□□ 0.3
DUSP9Q99956 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.9■□□□□ 0.3
DUSP9Q99956 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUSP9Q99956 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
DUSP9Q99956 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.89■□□□□ 0.3
DUSP9Q99956 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
DUSP9Q99956 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
DUSP9Q99956 MTHFR-210ENST00000641407 2387 ntBASIC16.89■□□□□ 0.3
DUSP9Q99956 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
DUSP9Q99956 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
DUSP9Q99956 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUSP9Q99956 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.89■□□□□ 0.29
DUSP9Q99956 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DUSP9Q99956 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUSP9Q99956 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUSP9Q99956 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUSP9Q99956 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.89■□□□□ 0.29
DUSP9Q99956 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUSP9Q99956 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.89■□□□□ 0.29
DUSP9Q99956 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUSP9Q99956 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUSP9Q99956 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUSP9Q99956 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.89■□□□□ 0.29
DUSP9Q99956 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.89■□□□□ 0.29
DUSP9Q99956 COX20P2-201ENST00000452636 358 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms