Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 AC107918.4-201ENST00000641966 3141 ntBASIC13.51□□□□□ -0.25
CPNE2Q96FN4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 AP3S2-216ENST00000617003 1561 ntBASIC13.5□□□□□ -0.25
CPNE2Q96FN4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 WASH3P-207ENST00000560956 1394 ntBASIC13.5□□□□□ -0.25
CPNE2Q96FN4 FO538757.1-201ENST00000623083 1397 ntBASIC13.5□□□□□ -0.25
CPNE2Q96FN4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 LINC01225-203ENST00000563550 1244 ntBASIC13.5□□□□□ -0.25
CPNE2Q96FN4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 PEG13-201ENST00000631594 5667 ntBASIC13.5□□□□□ -0.25
CPNE2Q96FN4 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CPNE2Q96FN4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms