Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX11Q96FC9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
DDX11Q96FC9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.37■□□□□ 0.53
DDX11Q96FC9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 ELK1P1-201ENST00000485699 580 ntBASIC18.37■□□□□ 0.53
DDX11Q96FC9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 AC092337.1-201ENST00000568699 1129 ntBASIC18.37■□□□□ 0.53
DDX11Q96FC9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 AC017083.2-201ENST00000608069 979 ntBASIC18.37■□□□□ 0.53
DDX11Q96FC9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX11Q96FC9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX11Q96FC9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 TARDBPP1-201ENST00000442013 1203 ntBASIC18.36■□□□□ 0.53
DDX11Q96FC9 RN7SL837P-201ENST00000463010 287 ntBASIC18.36■□□□□ 0.53
DDX11Q96FC9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX11Q96FC9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX11Q96FC9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms