Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
AP3S1Q92572 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.66□□□□□ -0.22
AP3S1Q92572 AC109635.5-201ENST00000533593 962 ntBASIC13.66□□□□□ -0.22
AP3S1Q92572 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.66□□□□□ -0.22
AP3S1Q92572 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.66□□□□□ -0.22
AP3S1Q92572 AC008667.4-201ENST00000607370 168 ntBASIC13.66□□□□□ -0.22
AP3S1Q92572 AC012306.2-201ENST00000609350 630 ntBASIC13.66□□□□□ -0.22
AP3S1Q92572 AL121956.5-201ENST00000625261 221 ntBASIC13.66□□□□□ -0.22
AP3S1Q92572 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
AP3S1Q92572 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S1Q92572 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
AP3S1Q92572 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S1Q92572 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
AP3S1Q92572 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S1Q92572 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AP3S1Q92572 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S1Q92572 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.65□□□□□ -0.22
AP3S1Q92572 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
AP3S1Q92572 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S1Q92572 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.65□□□□□ -0.22
AP3S1Q92572 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.65□□□□□ -0.22
AP3S1Q92572 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.65□□□□□ -0.22
AP3S1Q92572 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S1Q92572 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S1Q92572 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.65□□□□□ -0.22
AP3S1Q92572 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S1Q92572 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AP3S1Q92572 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S1Q92572 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
AP3S1Q92572 AC018442.1-201ENST00000421439 2061 ntBASIC13.65□□□□□ -0.22
AP3S1Q92572 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S1Q92572 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
AP3S1Q92572 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
AP3S1Q92572 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S1Q92572 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S1Q92572 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.65□□□□□ -0.23
AP3S1Q92572 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
AP3S1Q92572 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
AP3S1Q92572 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 CICP11-201ENST00000434745 2827 ntBASIC13.64□□□□□ -0.23
AP3S1Q92572 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S1Q92572 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AP3S1Q92572 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S1Q92572 MRPL20P1-201ENST00000400819 433 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms