Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
SHC3Q92529 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.43■□□□□ 0.22
SHC3Q92529 AL138799.1-201ENST00000448213 1675 ntBASIC16.43■□□□□ 0.22
SHC3Q92529 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SHC3Q92529 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.42■□□□□ 0.22
SHC3Q92529 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SHC3Q92529 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.42■□□□□ 0.22
SHC3Q92529 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SHC3Q92529 MIR661-201ENST00000384842 89 ntBASIC16.42■□□□□ 0.22
SHC3Q92529 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.42■□□□□ 0.22
SHC3Q92529 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.42■□□□□ 0.22
SHC3Q92529 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.42■□□□□ 0.22
SHC3Q92529 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.42■□□□□ 0.22
SHC3Q92529 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.42■□□□□ 0.22
SHC3Q92529 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.42■□□□□ 0.22
SHC3Q92529 AC106881.1-201ENST00000605849 3329 ntBASIC16.42■□□□□ 0.22
SHC3Q92529 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.42■□□□□ 0.22
SHC3Q92529 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHC3Q92529 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SHC3Q92529 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.41■□□□□ 0.22
SHC3Q92529 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SHC3Q92529 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SHC3Q92529 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.41■□□□□ 0.22
SHC3Q92529 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.41■□□□□ 0.22
SHC3Q92529 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.41■□□□□ 0.22
SHC3Q92529 DFFBP1-201ENST00000433250 979 ntBASIC16.41■□□□□ 0.22
SHC3Q92529 RPL13AP25-201ENST00000484130 612 ntBASIC16.41■□□□□ 0.22
SHC3Q92529 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.41■□□□□ 0.22
SHC3Q92529 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.41■□□□□ 0.22
SHC3Q92529 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.41■□□□□ 0.22
SHC3Q92529 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.41■□□□□ 0.22
SHC3Q92529 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SHC3Q92529 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.41■□□□□ 0.22
SHC3Q92529 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.41■□□□□ 0.22
SHC3Q92529 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.41■□□□□ 0.22
SHC3Q92529 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SHC3Q92529 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHC3Q92529 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 LILRP1-201ENST00000444199 1370 ntBASIC16.4■□□□□ 0.22
SHC3Q92529 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.4■□□□□ 0.22
SHC3Q92529 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC3Q92529 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHC3Q92529 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms