Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 HNRNPUP1-201ENST00000554987 333 ntBASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 AC025062.2-201ENST00000605477 670 ntBASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 AC107918.4-202ENST00000641623 219 ntBASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 AC130686.1-201ENST00000622936 2466 ntBASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
MBD3L1Q8WWY6 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.15□□□□□ -0.47
MBD3L1Q8WWY6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
MBD3L1Q8WWY6 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
MBD3L1Q8WWY6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
MBD3L1Q8WWY6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
MBD3L1Q8WWY6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
MBD3L1Q8WWY6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 KRT8P24-201ENST00000560290 1559 ntBASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 EEF1DP4-201ENST00000446006 880 ntBASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 FGFR3P6-201ENST00000457012 610 ntBASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 CXCL1P1-201ENST00000502804 216 ntBASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 AC116407.4-201ENST00000623319 1061 ntBASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.14□□□□□ -0.47
MBD3L1Q8WWY6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms