Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 HYMAI-201ENST00000635591 3347 ntBASIC15.43■□□□□ 0.06
HMGB4Q8WW32 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 LINC02447-202ENST00000501888 2146 ntBASIC15.43■□□□□ 0.06
HMGB4Q8WW32 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 AC004066.1-201ENST00000502488 802 ntBASIC15.43■□□□□ 0.06
HMGB4Q8WW32 SCARNA20.5-201ENST00000516991 142 ntBASIC15.43■□□□□ 0.06
HMGB4Q8WW32 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HMGB4Q8WW32 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AL162727.3-201ENST00000635661 2787 ntBASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AC138028.6-201ENST00000616106 1482 ntBASIC15.42■□□□□ 0.06
HMGB4Q8WW32 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AL139094.1-201ENST00000405549 1188 ntBASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AC091804.1-201ENST00000486888 567 ntBASIC15.42■□□□□ 0.06
HMGB4Q8WW32 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AL023775.1-201ENST00000454907 1746 ntBASIC15.42■□□□□ 0.06
HMGB4Q8WW32 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 AL158070.2-201ENST00000623713 1621 ntBASIC15.42■□□□□ 0.06
HMGB4Q8WW32 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 LINC02199-201ENST00000506655 2702 ntBASIC15.42■□□□□ 0.06
HMGB4Q8WW32 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HMGB4Q8WW32 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGB4Q8WW32 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HMGB4Q8WW32 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGB4Q8WW32 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGB4Q8WW32 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGB4Q8WW32 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGB4Q8WW32 AC007787.1-201ENST00000588095 1583 ntBASIC15.41■□□□□ 0.06
HMGB4Q8WW32 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms